Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prc-barrel domain-containing protein | IZT61_16165 | Not Available | + | 3985299 - 3985799 | 18838.4 |
| duf2254 domain-containing protein | IZT61_16170 | P9WM34 | - | 3986475 - 3987740 | 48430.0 |
| hypothetical protein | IZT61_16175 | Not Available | - | 3987740 - 3988129 | 14656.9 |
| trypsin-like peptidase domain-containing protein | IZT61_16180 | Q9Z6T0 | - | 3988262 - 3989761 | 52931.2 |
| hypothetical protein | IZT61_16185 | Not Available | - | 3989785 - 3990075 | 10516.6 |
| hypothetical protein | IZT61_16190 | Not Available | - | 3990087 - 3990668 | 21630.0 |
| hypothetical protein | IZT61_16195 | Not Available | - | 3990665 - 3991222 | 19604.3 |
| hypothetical protein | IZT61_16200 | Not Available | - | 3991223 - 3991603 | 13835.5 |
| sdr family oxidoreductase | IZT61_16205 | C8WJW0 | - | 3991765 - 3992568 | 29003.8 |
| duf305 domain-containing protein | IZT61_16210 | Q5UPL7 | - | 3992663 - 3993115 | 17192.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.