Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_16115 | Not Available | - | 3973192 - 3973353 | 5842.08 |
| pas domain s-box protein | IZT61_16120 | Q02998 | - | 3973440 - 3978644 | 196992.0 |
| chemotaxis protein cheb | IZT61_16125 | P62642 | - | 3978714 - 3979745 | 38019.8 |
| acyl-coa desaturase | IZT61_16130 | A9SIZ6 | - | 3980006 - 3981082 | 41121.5 |
| phosphoribosylpyrophosphate synthetase | IZT61_16135 | Not Available | + | 3981452 - 3981763 | 11321.3 |
| bon domain-containing protein | IZT61_16140 | Not Available | + | 3981819 - 3982295 | 17344.0 |
| hypothetical protein | IZT61_16145 | Not Available | + | 3982365 - 3982943 | 20079.1 |
| duf421 domain-containing protein | IZT61_16150 | P96697 | + | 3983031 - 3983570 | 19594.2 |
| ai-2e family transporter | IZT61_16155 | O32095 | + | 3983617 - 3984660 | 37711.8 |
| hypothetical protein | IZT61_16160 | Not Available | + | 3984704 - 3985288 | 21670.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.