Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_01510 | Not Available | - | 352296 - 353066 | 27861.0 |
| hypothetical protein | IZT61_01515 | Not Available | - | 353300 - 353671 | 13896.2 |
| type ii toxin-antitoxin system vapc family toxin | IZT61_01520 | P9WFA6 | - | 353807 - 354175 | 13696.9 |
| hypothetical protein | IZT61_01525 | Not Available | - | 354175 - 354384 | 8177.81 |
| hypothetical protein | IZT61_01530 | Not Available | + | 354653 - 355384 | 27138.3 |
| phospho-sugar mutase | IZT61_01535 | P18159 | - | 355608 - 357344 | 63370.9 |
| aspartate kinase | IZT61_01540 | P08660 | + | 357671 - 358984 | 48484.3 |
| 2-oxoisovalerate dehydrogenase | IZT61_01545 | P58023 | + | 359004 - 359210 | 7785.39 |
| type ii toxin-antitoxin system hica family toxin | IZT61_01550 | Not Available | + | 359210 - 359443 | 8689.77 |
| hypothetical protein | IZT61_01555 | Not Available | - | 359445 - 359609 | 6132.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.