Pedobacter endophyticus JBR3-12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter endophyticus
StrainJBR3-12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter endophyticus JBR3-12

Accession NumberCP064939.1

Gene Summary

Adenine Count

1588031 bp

Thymine Count

1595629 bp

Guanine Count

1118331 bp

Cytosine Count

1124079 bp

Genome Length

5426070 bp

Protein-coding Genes

4366 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
is200/is605 family transposaseIZT61_15215Not Available-3738687 - 373912117189.4
pd-(d/e)xk nuclease family proteinIZT61_15220Q8DT75-3739877 - 3742741109238.0
uvrd-helicase domain-containing proteinIZT61_15225P45157-3742750 - 3745986122621.0
duf559 domain-containing proteinIZT61_15230P44116-3746163 - 374668419995.4
trna threonylcarbamoyladenosine dehydrataseIZT61_15235Q46927-3746821 - 374761228690.2
tatd family hydrolaseIZT61_15240P73335-3747661 - 374832324789.4
thioredoxin family proteinIZT61_15245P35088+3748435 - 374897419690.6
hypothetical proteinIZT61_15250Not Available-3749089 - 37493048242.7
glycoside hydrolase family 3IZT61_15255P40406-3749478 - 375109759498.3
hypothetical proteinIZT61_15260Not Available+3751446 - 37516256510.53

Displaying genes 3041 – 3050 of 4428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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