Pedobacter endophyticus JBR3-12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter endophyticus
StrainJBR3-12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter endophyticus JBR3-12

Accession NumberCP064939.1

Gene Summary

Adenine Count

1588031 bp

Thymine Count

1595629 bp

Guanine Count

1118331 bp

Cytosine Count

1124079 bp

Genome Length

5426070 bp

Protein-coding Genes

4366 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf4292 domain-containing proteinIZT61_15005Not Available+3687916 - 368871029362.5
peptidoglycan dd-metalloendopeptidase family proteinIZT61_15010P37690+3688957 - 369024347918.5
dmt family transporterIZT61_15015B4SE06+3690613 - 369090010683.8
twin-arginine translocase tata/tate family subunitIZT61_15020A6H2G3+3690980 - 36911807047.81
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataIZT61_15025B3QYQ7+3691200 - 369262151405.2
transglycosylase slt domain-containing proteinIZT61_15030P0AEZ8+3692725 - 369412852240.3
phospholipase c, phosphocholine-specificIZT61_15035Q9RGS8+3694481 - 369700995326.5
nadp-dependent malic enzymeIZT61_15040P43837+3697238 - 369955984566.8
holliday junction branch migration protein ruvaIZT61_15045Q11Z44+3699630 - 370021421339.1
cell surface protein spraIZT61_15050Not Available+3700227 - 3707402268461.0

Displaying genes 3001 – 3010 of 4428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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