Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 127 protein | IZT61_00110 | O31411 | + | 22895 - 25408 | 93194.0 |
| ompa family protein | IZT61_00115 | P28612 | + | 25480 - 26343 | 31799.7 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | IZT61_00120 | Q8A0U8 | - | 26487 - 27152 | 25124.1 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | IZT61_00125 | A6GW82 | - | 27254 - 28303 | 39933.1 |
| abc transporter permease | IZT61_00130 | Q7M8U0 | + | 28504 - 29748 | 45975.8 |
| hypothetical protein | IZT61_00135 | Not Available | + | 29893 - 30150 | 9944.75 |
| duf2807 domain-containing protein | IZT61_00140 | Not Available | - | 30577 - 31179 | 21384.6 |
| response regulator | IZT61_00145 | P37478 | + | 31772 - 32128 | 13181.9 |
| aarf/abc1/ubib kinase family protein | IZT61_00150 | Q54IH6 | - | 32129 - 33433 | 50387.1 |
| tetr/acrr family transcriptional regulator | IZT61_00155 | Not Available | - | 33439 - 34092 | 25588.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.