Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_14655 | Not Available | - | 3609170 - 3609622 | 17471.9 |
| superoxide dismutase | IZT61_14660 | P28760 | - | 3609723 - 3610331 | 22433.4 |
| nucleoside deaminase | IZT61_14665 | Q99W51 | - | 3610469 - 3610936 | 17524.2 |
| hypothetical protein | IZT61_14670 | Not Available | + | 3611020 - 3611499 | 17140.7 |
| pp_02907 | IZT61_14675 | Not Available | - | 3611592 - 3611927 | Not Available |
| sodium/sugar symporter | IZT61_14680 | P96169 | + | 3612186 - 3613862 | 60721.7 |
| hypothetical protein | IZT61_14685 | Not Available | - | 3614693 - 3615076 | 14290.2 |
| abc transporter permease | IZT61_14690 | P44250 | - | 3615078 - 3616271 | 43621.6 |
| mbl fold metallo-hydrolase | IZT61_14695 | P75849 | - | 3616401 - 3617039 | 23563.1 |
| gliding motility lipoprotein gldd | IZT61_14700 | Not Available | - | 3617171 - 3617758 | 23106.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.