Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spfh domain-containing protein | IZT61_14255 | Q9CAR7 | - | 3516391 - 3517323 | 34574.0 |
| hypothetical protein | IZT61_14260 | Not Available | + | 3517438 - 3517623 | 6587.28 |
| fkbm family methyltransferase | IZT61_14265 | Not Available | - | 3518520 - 3519326 | 30171.3 |
| fmn-binding negative transcriptional regulator | IZT61_14270 | P21341 | - | 3519359 - 3519979 | 23624.9 |
| aspartyl/asparaginyl beta-hydroxylase domain-containing protein | IZT61_14275 | Q989T9 | - | 3519992 - 3520849 | 32234.1 |
| aminoglycoside 6-adenylyltransferase | IZT61_14280 | Not Available | - | 3520866 - 3522287 | 55769.9 |
| tonb-dependent receptor | IZT61_14285 | Not Available | - | 3522289 - 3524712 | 91647.5 |
| n-acetyltransferase | IZT61_14290 | Not Available | - | 3524743 - 3525801 | 40430.2 |
| cyclic peptide export abc transporter | IZT61_14295 | P33951 | - | 3525798 - 3527438 | 62737.4 |
| hypothetical protein | IZT61_14300 | Not Available | - | 3527481 - 3528602 | 42840.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.