Pedobacter endophyticus JBR3-12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter endophyticus
StrainJBR3-12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter endophyticus JBR3-12

Accession NumberCP064939.1

Gene Summary

Adenine Count

1588031 bp

Thymine Count

1595629 bp

Guanine Count

1118331 bp

Cytosine Count

1124079 bp

Genome Length

5426070 bp

Protein-coding Genes

4366 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
laci family dna-binding transcriptional regulatorIZT61_14155Q45831-3485053 - 348608738546.3
tonb-dependent receptorIZT61_14160T2KPJ3+3486341 - 3489529117404.0
ragb/susd family nutrient uptake outer membrane proteinIZT61_14165T2KNB8+3489553 - 349134966151.5
duf5123 domain-containing proteinIZT61_14170Not Available+3491360 - 349295856853.3
pectin esteraseIZT61_14175Q8L7Q7+3493427 - 349442836753.7
rhamnogalacturonan acetylesteraseIZT61_14180O31523+3494902 - 349564827439.0
nadp-dependent glyceraldehyde-3-phosphate dehydrogenaseIZT61_14185Q59931-3495698 - 349732360328.7
mfs transporterIZT61_14190P0AA79-3497467 - 349890653408.6
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseIZT61_14195P50846-3498927 - 349958924161.6
sugar kinaseIZT61_14200D4GSE6-3499772 - 350082138800.6

Displaying genes 2831 – 2840 of 4428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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