Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | IZT61_01360 | I1RV22 | - | 312433 - 312879 | 17181.6 |
| yajq family cyclic di-gmp-binding protein | IZT61_01365 | Q11SS5 | - | 313040 - 313531 | 18206.2 |
| hypothetical protein | IZT61_01370 | Not Available | + | 313607 - 314212 | 21440.3 |
| polyphosphate kinase 1 | IZT61_01375 | Q87S51 | + | 314318 - 316378 | 79522.8 |
| exopolyphosphatase | IZT61_01380 | Q8RF47 | + | 316378 - 317259 | 33115.9 |
| 6-phosphogluconolactonase | IZT61_01385 | Q9LMX8 | - | 318031 - 318756 | 27338.3 |
| glucose-6-phosphate dehydrogenase | IZT61_01390 | P48992 | - | 318840 - 320354 | 57947.9 |
| nadp-dependent phosphogluconate dehydrogenase | IZT61_01395 | P80859 | - | 320380 - 321795 | 52086.2 |
| rok family protein | IZT61_01400 | Q49988 | - | 322279 - 323034 | 27806.5 |
| susc/raga family tonb-linked outer membrane protein | IZT61_01405 | T2KM18 | + | 323643 - 326954 | 120846.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.