Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit c | IZT61_13905 | A5G9B7 | + | 3434278 - 3434778 | 19314.2 |
| nadh-quinone oxidoreductase subunit d | IZT61_13910 | Q11VB5 | + | 3434782 - 3435996 | 46292.4 |
| nad(p)h-dependent oxidoreductase subunit e | IZT61_13915 | Q9D6J6 | + | 3435989 - 3436504 | 19138.1 |
| nadh-quinone oxidoreductase subunit nuof | IZT61_13920 | P56913 | + | 3436579 - 3437946 | 49582.6 |
| (2fe-2s)-binding protein | IZT61_13925 | Q1RKD2 | + | 3438092 - 3439102 | 37892.3 |
| nadh-quinone oxidoreductase subunit nuoh | IZT61_13930 | A5FKK0 | + | 3439102 - 3440139 | 38413.8 |
| nadh-quinone oxidoreductase subunit i | IZT61_13935 | Q11VC0 | + | 3440142 - 3440645 | 19171.5 |
| nadh-quinone oxidoreductase subunit j | IZT61_13940 | Q1RKE8 | + | 3440761 - 3441264 | 18291.4 |
| nadh-quinone oxidoreductase subunit nuok | IZT61_13945 | A6H1Q3 | + | 3441264 - 3441593 | 12044.2 |
| nadh-quinone oxidoreductase subunit l | IZT61_13950 | P29924 | + | 3441774 - 3443669 | 69488.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.