Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_13555 | Not Available | - | 3341967 - 3342341 | 13606.0 |
| gxxexxy protein | IZT61_13560 | Not Available | - | 3342616 - 3343026 | 15672.3 |
| yifb family mg chelatase-like aaa atpase | IZT61_13565 | P45049 | - | 3343612 - 3345150 | 56121.0 |
| signal recognition particle protein | IZT61_13570 | P37105 | - | 3345536 - 3346876 | 48944.8 |
| hypothetical protein | IZT61_13575 | Not Available | + | 3347078 - 3349501 | 92231.2 |
| duf3078 domain-containing protein | IZT61_13580 | Not Available | - | 3350035 - 3351036 | 37747.9 |
| hypothetical protein | IZT61_13585 | Not Available | - | 3351131 - 3351406 | 11148.9 |
| hypothetical protein | IZT61_13590 | Not Available | - | 3351448 - 3352200 | 28637.8 |
| glucosaminidase domain-containing protein | IZT61_13595 | O32083 | - | 3352375 - 3353220 | 32110.1 |
| glucosaminidase domain-containing protein | IZT61_13600 | O32083 | - | 3353312 - 3353971 | 25139.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.