Pedobacter endophyticus JBR3-12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter endophyticus
StrainJBR3-12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter endophyticus JBR3-12

Accession NumberCP064939.1

Gene Summary

Adenine Count

1588031 bp

Thymine Count

1595629 bp

Guanine Count

1118331 bp

Cytosine Count

1124079 bp

Genome Length

5426070 bp

Protein-coding Genes

4366 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
nif3-like dinuclear metal center hexameric proteinIZT61_13355P54472+3301503 - 330260040821.1
hypothetical proteinIZT61_13360Not Available+3302600 - 330334328305.9
tetratricopeptide repeat proteinIZT61_13365Not Available+3303501 - 330498555714.3
ketoacyl-acp synthase iiiIZT61_13370Q2N925-3305327 - 330640639571.7
lud domain-containing proteinIZT61_13375Q5WJD9-3306992 - 330763624759.8
atp-dependent zinc metalloprotease ftshIZT61_13380A6LD25-3307703 - 330972173998.0
ribosome silencing factorIZT61_13385Q9KD89-3309753 - 331012714097.7
biotin--[acetyl-coa-carboxylase] ligaseIZT61_13390E0U174+3310172 - 331094828917.6
protein-disulfide reductase dsbd n-terminal domain-containing proteinIZT61_13395Not Available+3310956 - 331140516761.5
thioredoxin family proteinIZT61_13400Q87KW0+3311551 - 331324861800.4

Displaying genes 2671 – 2680 of 4428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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