Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_13305 | Not Available | + | 3289001 - 3289924 | 34656.1 |
| hsp70 family protein | IZT61_13310 | Q45551 | - | 3290467 - 3292941 | 93707.9 |
| hypothetical protein | IZT61_13315 | Not Available | - | 3292943 - 3293230 | 10882.1 |
| dmt family transporter | IZT61_13320 | Not Available | + | 3293581 - 3294091 | 18663.7 |
| hypothetical protein | IZT61_13325 | Not Available | + | 3294096 - 3294251 | 5924.34 |
| duf3820 family protein | IZT61_13330 | P0AD41 | - | 3294407 - 3294625 | 8432.66 |
| atp-binding protein | IZT61_13335 | Q58939 | - | 3294627 - 3295763 | 43448.5 |
| transcription-repair coupling factor | IZT61_13340 | P37474 | - | 3295854 - 3299192 | 126257.0 |
| duf2752 domain-containing protein | IZT61_13345 | Not Available | + | 3300101 - 3300403 | 11214.8 |
| tm2 domain-containing protein | IZT61_13350 | Q54KZ0 | + | 3300409 - 3300783 | 13918.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.