Pedobacter endophyticus JBR3-12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter endophyticus
StrainJBR3-12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter endophyticus JBR3-12

Accession NumberCP064939.1

Gene Summary

Adenine Count

1588031 bp

Thymine Count

1595629 bp

Guanine Count

1118331 bp

Cytosine Count

1124079 bp

Genome Length

5426070 bp

Protein-coding Genes

4366 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
phosphodiester glycosidase family proteinIZT61_12905Q8BJ48-3191253 - 319211931721.9
zinc-dependent metalloproteaseIZT61_12910Not Available-3192883 - 319539093380.2
aspartyl protease family proteinIZT61_12915Not Available-3195482 - 319672946915.3
d-alanyl-d-alanine carboxypeptidaseIZT61_12920P45161+3196779 - 319810750427.8
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeIZT61_12925B8J3V0+3198114 - 319916037742.0
histidine phosphatase family proteinIZT61_12930Not Available+3199213 - 319971319023.8
m15 family metallopeptidaseIZT61_12935P77790-3199863 - 320054025555.0
alanine dehydrogenaseIZT61_12940Q6LX40-3201439 - 320266544380.0
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeIZT61_12945O05515-3202853 - 320326915783.8
multidrug efflux smr transporterIZT61_12950Q7MZY0-3203344 - 320366411692.6

Displaying genes 2581 – 2590 of 4428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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