Pedobacter endophyticus JBR3-12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter endophyticus
StrainJBR3-12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter endophyticus JBR3-12

Accession NumberCP064939.1

Gene Summary

Adenine Count

1588031 bp

Thymine Count

1595629 bp

Guanine Count

1118331 bp

Cytosine Count

1124079 bp

Genome Length

5426070 bp

Protein-coding Genes

4366 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
gnat family n-acetyltransferaseIZT61_12855P26945-3181393 - 318185717286.7
acyl-acp--udp-n-acetylglucosamine o-acyltransferaseIZT61_12860Q2LVL6-3182097 - 318288228545.4
bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydrataseIZT61_12865Q8A015-3182882 - 318429452172.4
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseIZT61_12870A0M2A1-3184284 - 318536038628.8
hd domain-containing proteinIZT61_12875P39651-3185481 - 318670446355.3
pglz domain-containing proteinIZT61_12880P35163+3186816 - 318836960427.4
sigma-70 family rna polymerase sigma factorIZT61_12885Q06198+3188716 - 318929722299.8
zf-hc2 domain-containing proteinIZT61_12890Not Available+3189294 - 318977617963.8
cold-shock proteinIZT61_12895O30875-3189975 - 31901666928.29
hypothetical proteinIZT61_12900Not Available-3190271 - 319119435226.2

Displaying genes 2571 – 2580 of 4428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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