Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase family protein | IZT61_01210 | Not Available | + | 272986 - 274500 | 57694.6 |
| glycosyltransferase family 2 protein | IZT61_01215 | Not Available | + | 274469 - 275332 | 32272.7 |
| glycosyltransferase family 4 protein | IZT61_01220 | Q0P9C7 | + | 275346 - 276464 | 42475.4 |
| glycosyltransferase family 4 protein | IZT61_01225 | P39862 | + | 276478 - 277608 | 42654.6 |
| right-handed parallel beta-helix repeat-containing protein | IZT61_01230 | P0DW93 | + | 277874 - 282817 | 177430.0 |
| polysaccharide deacetylase family protein | IZT61_01235 | P94361 | + | 282833 - 283591 | 28704.6 |
| hypothetical protein | IZT61_01240 | Not Available | - | 283878 - 284756 | 32736.0 |
| gfo/idh/moca family oxidoreductase | IZT61_01245 | Q6M0B9 | - | 284762 - 285766 | 37248.8 |
| wecb/taga/cpsf family glycosyltransferase | IZT61_01250 | P27620 | - | 285767 - 286507 | 28553.9 |
| sdr family oxidoreductase | IZT61_01255 | Q6DF08 | - | 287279 - 288298 | 38373.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.