Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_01160 | Not Available | - | 260882 - 261043 | 6193.52 |
| glycosyltransferase family 4 protein | IZT61_01165 | Not Available | + | 261442 - 262485 | 39160.1 |
| duf1972 domain-containing protein | IZT61_01170 | Not Available | + | 262983 - 264101 | 42890.3 |
| serine acetyltransferase | IZT61_01175 | P0ACD0 | + | 264137 - 264706 | 20756.3 |
| polysaccharide biosynthesis/export family protein | IZT61_01180 | Q45407 | + | 265467 - 266219 | 28183.8 |
| polysaccharide biosynthesis tyrosine autokinase | IZT61_01185 | O52788 | + | 266223 - 268607 | 89734.5 |
| hypothetical protein | IZT61_01190 | Not Available | + | 268641 - 269489 | 31745.7 |
| oligosaccharide flippase family protein | IZT61_01195 | Not Available | + | 269496 - 270800 | 49095.3 |
| glycosyltransferase family 2 protein | IZT61_01200 | Not Available | + | 270810 - 271754 | 37483.0 |
| glycosyltransferase | IZT61_01205 | P42982 | + | 271761 - 272993 | 46421.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.