Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_01060 | Not Available | - | 236234 - 236836 | 22949.0 |
| atp-binding protein | IZT61_01065 | Q58939 | + | 237001 - 238188 | 45065.4 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | IZT61_01070 | B8FJV3 | + | 238288 - 239751 | 53761.2 |
| ahpc/tsa family protein | IZT61_01075 | Q73B22 | + | 239751 - 240863 | 41488.5 |
| response regulator transcription factor | IZT61_01080 | P35163 | + | 240967 - 241656 | 25917.6 |
| rna pseudouridine synthase | IZT61_01085 | Q89AH2 | + | 242171 - 242893 | 27557.4 |
| chloride channel protein | IZT61_01090 | Q8XTT4 | + | 242924 - 244711 | 65730.1 |
| sigma-54-dependent fis family transcriptional regulator | IZT61_01095 | Q00934 | - | 245067 - 246476 | 52139.4 |
| serine hydrolase | IZT61_01100 | Not Available | - | 246590 - 247834 | 47760.0 |
| tonb-dependent receptor | IZT61_01105 | Q1CBU1 | + | 248343 - 250211 | 68111.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.