Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | IZT61_01010 | Q8DSN0 | - | 224964 - 225740 | 28422.1 |
| comec family competence protein | IZT61_01015 | P39695 | - | 225808 - 227895 | 80020.7 |
| helix-hairpin-helix domain-containing protein | IZT61_01020 | Not Available | - | 227920 - 229950 | 77155.6 |
| hypothetical protein | IZT61_01025 | Not Available | - | 229940 - 230740 | 29056.9 |
| hypothetical protein | IZT61_01030 | Not Available | + | 230861 - 231076 | 8225.9 |
| type ii toxin-antitoxin system yafq family toxin | IZT61_01035 | Not Available | + | 231076 - 231345 | 10450.6 |
| merr family transcriptional regulator | IZT61_01040 | P62172 | - | 231419 - 231754 | 13145.9 |
| alanine--trna ligase | IZT61_01045 | Q11V49 | + | 231870 - 234485 | 98077.5 |
| hypothetical protein | IZT61_01050 | Not Available | + | 235005 - 235559 | 20095.2 |
| hypothetical protein | IZT61_01055 | Not Available | - | 235595 - 236098 | 19552.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.