Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase | IZT61_00860 | Q11U61 | + | 190273 - 192408 | 77663.4 |
| hypothetical protein | IZT61_00865 | Not Available | + | 192575 - 192757 | 7024.67 |
| hypothetical protein | IZT61_00870 | Not Available | + | 192757 - 193233 | 18396.0 |
| ribulose-phosphate 3-epimerase | IZT61_00875 | O34557 | + | 193234 - 193905 | 24052.3 |
| carboxypeptidase-like regulatory domain-containing protein | IZT61_00880 | T2KMI3 | + | 194045 - 196471 | 91806.7 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | IZT61_00885 | Q8A8L4 | + | 196879 - 197952 | 39231.1 |
| d-2-hydroxyacid dehydrogenase | IZT61_00890 | Q9X1C1 | + | 198014 - 198964 | 33766.7 |
| hypothetical protein | IZT61_00895 | Not Available | - | 199009 - 199155 | 5603.14 |
| hypothetical protein | IZT61_00900 | Not Available | - | 199136 - 199660 | 20225.5 |
| sam-dependent chlorinase/fluorinase | IZT61_00905 | O58212 | - | 199830 - 200609 | 29326.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.