Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_07655 | Not Available | - | 1921351 - 1921773 | 16106.6 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | IZT61_07660 | A5FIX6 | - | 1921770 - 1922675 | 33718.4 |
| division/cell wall cluster transcriptional repressor mraz | IZT61_07665 | A0M535 | - | 1922665 - 1923132 | 16963.4 |
| transposase | IZT61_07670 | Not Available | + | 1924122 - 1924694 | 22236.7 |
| phosphoglycerate kinase | IZT61_07675 | Q8A753 | - | 1924754 - 1925947 | 42552.1 |
| gnat family n-acetyltransferase | IZT61_07680 | O06744 | - | 1925950 - 1926390 | 16536.6 |
| type i glyceraldehyde-3-phosphate dehydrogenase | IZT61_07685 | O67161 | - | 1926652 - 1927641 | 35580.8 |
| cysteine-rich cwc family protein | IZT61_07690 | Not Available | - | 1927736 - 1927960 | 8355.05 |
| ribonucleoside-diphosphate reductase subunit alpha | IZT61_07695 | P36602 | - | 1928255 - 1930639 | 89370.6 |
| ribonucleotide-diphosphate reductase subunit beta | IZT61_07700 | Q9LSD0 | - | 1930854 - 1931825 | 37279.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.