Pedobacter endophyticus JBR3-12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter endophyticus
StrainJBR3-12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter endophyticus JBR3-12

Accession NumberCP064939.1

Gene Summary

Adenine Count

1588031 bp

Thymine Count

1595629 bp

Guanine Count

1118331 bp

Cytosine Count

1124079 bp

Genome Length

5426070 bp

Protein-coding Genes

4366 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinIZT61_07305Not Available-1835681 - 183595610328.2
alpha/beta hydrolaseIZT61_07310P23133+1835955 - 183678530665.0
ydei/ompd-associated family proteinIZT61_07315P96666+1836962 - 183754022092.7
cupin domain-containing proteinIZT61_07320Q9X113+1837586 - 183801115561.8
23s rrna (adenine(1618)-n(6))-methyltransferase rlmfIZT61_07325A8GBT4-1838223 - 183922437654.8
c4-dicarboxylate transporter dctaIZT61_07330P96603-1839396 - 184066745221.9
abc transporter atp-binding proteinIZT61_07335O31708-1841497 - 184326666588.4
trna pseudouridine(38-40) synthase truaIZT61_07340Q64XV0-1843461 - 184421328561.3
duf4293 domain-containing proteinIZT61_07345Not Available+1844298 - 184476517208.9
duf4256 domain-containing proteinIZT61_07350Not Available+1844850 - 184540120606.3

Displaying genes 1461 – 1470 of 4428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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