Pedobacter endophyticus JBR3-12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter endophyticus
StrainJBR3-12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter endophyticus JBR3-12

Accession NumberCP064939.1

Gene Summary

Adenine Count

1588031 bp

Thymine Count

1595629 bp

Guanine Count

1118331 bp

Cytosine Count

1124079 bp

Genome Length

5426070 bp

Protein-coding Genes

4366 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf3800 domain-containing proteinIZT61_07105Not Available+1782732 - 178359834326.4
hypothetical proteinIZT61_07110Not Available+1783766 - 178420316606.8
peptide-methionine (r)-s-oxide reductase msrbIZT61_07115B1J4W5+1784646 - 178509816809.8
peptide-methionine (s)-s-oxide reductase msraIZT61_07120Q5YUS0+1785171 - 178580324195.4
homogentisate 1,2-dioxygenaseIZT61_07125Q97Y16+1786524 - 178768144468.8
4-hydroxyphenylpyruvate dioxygenaseIZT61_07130Q9S2F4+1788015 - 178914542704.4
thioredoxin domain-containing proteinIZT61_07135A1SHU2-1789454 - 178997218968.9
peroxiredoxinIZT61_07140O24364-1789978 - 179043917136.4
duf58 domain-containing proteinIZT61_07145P9WLX4-1790517 - 179143435300.1
pqq-dependent sugar dehydrogenaseIZT61_07150P75804-1792792 - 179400043516.2

Displaying genes 1421 – 1430 of 4428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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