Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4397 domain-containing protein | IZT61_06955 | Not Available | - | 1752838 - 1753542 | 25567.7 |
| dna polymerase iii subunit beta | IZT61_06960 | P52023 | - | 1753669 - 1754793 | 41300.4 |
| gliding motility-associated abc transporter substrate-binding protein gldg | IZT61_06965 | Not Available | - | 1754827 - 1756512 | 62829.8 |
| gliding motility-associated abc transporter permease subunit gldf | IZT61_06970 | P0AFQ0 | - | 1756512 - 1757237 | 26711.9 |
| outer membrane beta-barrel protein | IZT61_06975 | Not Available | - | 1757621 - 1758196 | 20355.2 |
| hypothetical protein | IZT61_06980 | Not Available | - | 1758455 - 1758997 | 19548.6 |
| atp-binding cassette domain-containing protein | IZT61_06985 | P54592 | - | 1759001 - 1759708 | 25933.7 |
| hypothetical protein | IZT61_06990 | Not Available | - | 1759790 - 1760371 | 20187.1 |
| glycerophosphodiester phosphodiesterase family protein | IZT61_06995 | O07592 | - | 1760613 - 1761533 | 34545.6 |
| response regulator transcription factor | IZT61_07000 | P32967 | - | 1761674 - 1762306 | 23933.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.