Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| four helix bundle protein | IZT61_06855 | Not Available | - | 1730313 - 1730678 | 14058.8 |
| dmt family transporter | IZT61_06860 | P94177 | - | 1730775 - 1733885 | 113487.0 |
| hypothetical protein | IZT61_06865 | Not Available | - | 1734424 - 1734807 | 14362.2 |
| response regulator transcription factor | IZT61_06870 | P94514 | - | 1734817 - 1735512 | 26044.7 |
| insulinase family protein | IZT61_06875 | Not Available | + | 1735764 - 1736366 | 21725.6 |
| m28 family metallopeptidase | IZT61_06880 | E5A6Z0 | + | 1736597 - 1737946 | 50195.7 |
| tryptophan-rich sensory protein | IZT61_06885 | O28797 | + | 1738439 - 1738912 | 18117.8 |
| patatin-like phospholipase family protein | IZT61_06890 | O34731 | + | 1738963 - 1741260 | 86993.0 |
| hypothetical protein | IZT61_06895 | Not Available | + | 1741257 - 1741787 | 19885.5 |
| bama/tama family outer membrane protein | IZT61_06900 | Not Available | - | 1742231 - 1744579 | 89209.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.