Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | IZT61_06655 | T2KM18 | - | 1685938 - 1688964 | 112160.0 |
| response regulator | IZT61_06660 | T2KMF4 | + | 1689204 - 1693274 | 154358.0 |
| tetr/acrr family transcriptional regulator | IZT61_06665 | Not Available | + | 1693373 - 1694011 | 24373.0 |
| hypothetical protein | IZT61_06670 | Not Available | + | 1694273 - 1694512 | 8820.4 |
| duf3667 domain-containing protein | IZT61_06675 | Not Available | + | 1694641 - 1695282 | 24528.8 |
| hypothetical protein | IZT61_06680 | Not Available | + | 1695581 - 1695832 | 9152.3 |
| hypothetical protein | IZT61_06685 | Not Available | - | 1695959 - 1697389 | 54602.7 |
| Trna-leu | Not Available | Not Available | + | 1697773 - 1697852 | Not Available |
| duf3817 domain-containing protein | IZT61_06695 | O31485 | - | 1697930 - 1698238 | 11664.7 |
| fe-s protein assembly co-chaperone hscb | IZT61_06700 | A8H2M9 | - | 1698483 - 1699016 | 20731.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.