Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_06505 | Not Available | + | 1627201 - 1630053 | 107386.0 |
| patatin-like phospholipase family protein | IZT61_06510 | Not Available | - | 1630134 - 1632965 | 105198.0 |
| hypothetical protein | IZT61_06515 | Not Available | + | 1633954 - 1634232 | 10372.5 |
| m15 family metallopeptidase | IZT61_06520 | Not Available | + | 1634265 - 1635047 | 29092.7 |
| hypothetical protein | IZT61_06525 | Not Available | + | 1635178 - 1636524 | 49327.6 |
| hypothetical protein | IZT61_06530 | Not Available | + | 1636526 - 1638958 | 89127.2 |
| crp/fnr family transcriptional regulator | IZT61_06535 | Not Available | + | 1639612 - 1640172 | 21724.5 |
| hypothetical protein | IZT61_06540 | Not Available | + | 1640242 - 1640904 | 24648.9 |
| atp-binding protein | IZT61_06545 | P55530 | + | 1641410 - 1642429 | 38209.2 |
| s8 family peptidase | IZT61_06550 | Not Available | + | 1642392 - 1644935 | 96303.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.