Pedobacter endophyticus JBR3-12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter endophyticus
StrainJBR3-12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter endophyticus JBR3-12

Accession NumberCP064939.1

Gene Summary

Adenine Count

1588031 bp

Thymine Count

1595629 bp

Guanine Count

1118331 bp

Cytosine Count

1124079 bp

Genome Length

5426070 bp

Protein-coding Genes

4366 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
cytochrome c oxidase accessory protein ccogIZT61_06255P18396-1550889 - 155225051739.6
c-type cytochromeIZT61_06260D3NRE7-1552234 - 155305230557.4
hypothetical proteinIZT61_06265Not Available-1553189 - 15533717024.71
cytochrome-c oxidase, cbb3-type subunit iIZT61_06270D9IA43-1553376 - 155551781018.9
cbb3-type cytochrome oxidase assembly protein ccosIZT61_06275Not Available-1555592 - 15557716764.01
heavy metal translocating p-type atpase metal-binding domain-containing proteinIZT61_06280O33533-1555768 - 155815588400.0
oxygen-independent coproporphyrinogen iii oxidaseIZT61_06285P74132-1558166 - 155951250553.6
lactate dehydrogenaseIZT61_06290J7SHB8-1559512 - 155994015329.7
response regulatorIZT61_06295O78428-1560119 - 156115038198.9
pas domain-containing sensor histidine kinaseIZT61_06300P23222-1561156 - 156235544936.6

Displaying genes 1251 – 1260 of 4428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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