Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pp_00001 | IZT61_00010 | Not Available | + | 431 - 1012 | Not Available |
| duf3810 domain-containing protein | IZT61_00015 | Not Available | - | 1060 - 2142 | 41725.4 |
| txe/yoeb family addiction module toxin | IZT61_00020 | P0CJ64 | - | 2146 - 2406 | 10178.3 |
| hypothetical protein | IZT61_00025 | Not Available | - | 2458 - 2658 | 7517.03 |
| duf433 domain-containing protein | IZT61_00030 | P55438 | + | 2899 - 3132 | 8661.4 |
| dihydroorotase | IZT61_00035 | Q8TSA6 | - | 3462 - 4796 | 49316.8 |
| dead/deah box helicase | IZT61_00040 | P25888 | + | 5243 - 6589 | 50433.2 |
| gliding motility protein gldc | IZT61_00045 | Not Available | + | 7015 - 7350 | 12798.1 |
| hypothetical protein | IZT61_00050 | Not Available | + | 7708 - 8106 | 15009.3 |
| duf4974 domain-containing protein | IZT61_00055 | Not Available | + | 8792 - 9979 | 44852.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.