Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas aliaeris |
| Strain | DH-S5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas aliaeris DH-S5
Accession NumberCP061035.1
Gene Summary
Adenine Count
695033 bp
Thymine Count
700924 bp
Guanine Count
1266042 bp
Cytosine Count
1254663 bp
Genome Length
3916662 bp
Protein-coding Genes
3639 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system pilin assembly protein trbc | H5J25_18655 | P18473 | + | 8120 - 8863 | 26329.6 |
| site-specific dna-methyltransferase | H5J25_18660 | Not Available | + | 8866 - 10940 | 73487.1 |
| hypothetical protein | H5J25_18665 | Not Available | + | 10940 - 11302 | 13148.2 |
| conjugal transfer protein traf | H5J25_18670 | P14497 | + | 11304 - 12176 | 32111.1 |
| conjugal transfer protein trah | H5J25_18675 | P15069 | + | 12173 - 13615 | 51276.5 |
| conjugal transfer protein trag n-terminal domain-containing protein | H5J25_18680 | P33790 | + | 13631 - 16897 | 116212.0 |
| hypothetical protein | H5J25_18685 | Not Available | - | 16901 - 17140 | 8670.32 |
| error-prone dna polymerase | H5J25_18690 | Q92ZJ6 | - | 17720 - 20983 | 121399.0 |
| site-specific dna-methyltransferase | H5J25_18695 | Not Available | - | 20980 - 22444 | 51236.3 |
| protein imua | H5J25_18700 | Q9A3J1 | - | 22680 - 23441 | 26352.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.