Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas aliaeris |
| Strain | DH-S5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas aliaeris DH-S5
Accession NumberCP061035.1
Gene Summary
Adenine Count
695033 bp
Thymine Count
700924 bp
Guanine Count
1266042 bp
Cytosine Count
1254663 bp
Genome Length
3916662 bp
Protein-coding Genes
3639 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | H5J25_16400 | Q2YNM1 | + | 3469004 - 3469348 | 11826.7 |
| protein translocase subunit secd | H5J25_16405 | Q92H77 | + | 3469357 - 3470949 | 56778.7 |
| protein translocase subunit secf | H5J25_16410 | Q9ZE34 | + | 3470963 - 3471931 | 34990.1 |
| hypothetical protein | H5J25_16415 | Q2HJI2 | + | 3471976 - 3472347 | 12968.6 |
| laci family dna-binding transcriptional regulator | H5J25_16420 | Not Available | - | 3472332 - 3473512 | 42734.5 |
| class i mannose-6-phosphate isomerase | H5J25_16425 | Q59935 | - | 3473583 - 3474407 | 29823.3 |
| outer membrane protein assembly factor bamd | H5J25_16430 | Q9A6U9 | + | 3474592 - 3475512 | 33917.2 |
| dna repair protein recn | H5J25_16435 | Q87BS5 | + | 3475569 - 3477224 | 58128.8 |
| cold-shock protein | H5J25_16440 | P55390 | + | 3477537 - 3477743 | 7393.72 |
| hypothetical protein | H5J25_16445 | Not Available | + | 3477823 - 3478008 | 7050.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.