Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas aliaeris |
| Strain | DH-S5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
695033 bp
Thymine Count
700924 bp
Guanine Count
1266042 bp
Cytosine Count
1254663 bp
Genome Length
3916662 bp
Protein-coding Genes
3639 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | H5J25_11435 | Q8DDX8 | + | 2435957 - 2437143 | 41505.9 |
| Trna-ala | Not Available | Not Available | + | 2437215 - 2437290 | Not Available |
| fydln acid domain-containing protein | H5J25_11445 | Not Available | - | 2437416 - 2437733 | 11626.1 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | H5J25_11450 | Q1GT16 | + | 2437817 - 2439196 | 47131.0 |
| (d)cmp kinase | H5J25_11455 | A7IEB7 | + | 2439193 - 2439846 | 23496.0 |
| 30s ribosomal protein s1 | H5J25_11460 | P14129 | + | 2440372 - 2442102 | 62283.1 |
| integration host factor subunit beta | H5J25_11465 | Q11C35 | + | 2442318 - 2442596 | 10396.4 |
| Trna-leu | Not Available | Not Available | + | 2442712 - 2442797 | Not Available |
| abc transporter substrate-binding protein | H5J25_11475 | Q46863 | + | 2442866 - 2444338 | 52837.9 |
| duf4112 domain-containing protein | H5J25_11480 | Not Available | + | 2444344 - 2444775 | 15772.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.