Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas aliaeris |
| Strain | DH-S5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas aliaeris DH-S5
Accession NumberCP061035.1
Gene Summary
Adenine Count
695033 bp
Thymine Count
700924 bp
Guanine Count
1266042 bp
Cytosine Count
1254663 bp
Genome Length
3916662 bp
Protein-coding Genes
3639 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna recombination protein rmuc | H5J25_09485 | Q9REQ3 | - | 2011070 - 2012518 | 53066.0 |
| formate--tetrahydrofolate ligase | H5J25_09490 | Q11G79 | + | 2012720 - 2014384 | 58129.0 |
| duf2062 domain-containing protein | H5J25_09495 | Not Available | - | 2014415 - 2014930 | 18970.3 |
| ssra-binding protein smpb | H5J25_09500 | Q7X2N6 | - | 2014995 - 2015477 | 18261.2 |
| methyl-accepting chemotaxis protein | H5J25_09505 | P55652 | - | 2015684 - 2017468 | 62905.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | H5J25_09510 | A5V3L9 | - | 2017752 - 2018633 | 30779.6 |
| lytic transglycosylase domain-containing protein | H5J25_09515 | P0AGC4 | + | 2018722 - 2020704 | 71421.2 |
| transcription elongation factor greb | H5J25_09520 | Q9K0C5 | + | 2020716 - 2021219 | 18599.7 |
| doxx family protein | H5J25_09525 | P44069 | + | 2021272 - 2021649 | 13181.7 |
| nyn domain-containing protein | H5J25_09530 | Q57905 | + | 2021724 - 2022518 | 28387.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.