Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas aliaeris |
| Strain | DH-S5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas aliaeris DH-S5
Accession NumberCP061035.1
Gene Summary
Adenine Count
695033 bp
Thymine Count
700924 bp
Guanine Count
1266042 bp
Cytosine Count
1254663 bp
Genome Length
3916662 bp
Protein-coding Genes
3639 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase rimo | H5J25_07835 | A5V3Z4 | - | 1661533 - 1662825 | 47664.0 |
| urea carboxylase-associated family protein | H5J25_07840 | O31473 | - | 1662885 - 1663532 | 23687.1 |
| yqci/ycgg family protein | H5J25_07845 | Not Available | - | 1663529 - 1664236 | 26490.3 |
| homogentisate 1,2-dioxygenase | H5J25_07850 | B0T816 | - | 1664294 - 1665583 | 47351.9 |
| 4-hydroxyphenylpyruvate dioxygenase | H5J25_07855 | Q9I576 | - | 1665665 - 1666744 | 39782.7 |
| winged helix-turn-helix transcriptional regulator | H5J25_07860 | P62573 | + | 1666875 - 1667321 | 16037.4 |
| laci family dna-binding transcriptional regulator | H5J25_07865 | Q98DK4 | + | 1667427 - 1669558 | 76041.4 |
| bama/tama family outer membrane protein | H5J25_07870 | D2TN56 | + | 1669689 - 1671794 | 74316.6 |
| translocation/assembly module tamb domain-containing protein | H5J25_07875 | Q57523 | + | 1671794 - 1676071 | 148783.0 |
| succinyl-diaminopimelate desuccinylase | H5J25_07880 | Q1GRJ2 | - | 1676081 - 1677241 | 40517.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.