Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas aliaeris |
| Strain | DH-S5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas aliaeris DH-S5
Accession NumberCP061035.1
Gene Summary
Adenine Count
695033 bp
Thymine Count
700924 bp
Guanine Count
1266042 bp
Cytosine Count
1254663 bp
Genome Length
3916662 bp
Protein-coding Genes
3639 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspk | H5J25_05735 | P31706 | + | 1249906 - 1250895 | 34785.5 |
| general secretion pathway protein gspl | H5J25_05740 | P45789 | + | 1250892 - 1251986 | 38463.2 |
| type ii secretion system protein m | H5J25_05745 | P25061 | + | 1251986 - 1252462 | 16696.3 |
| type ii secretion system protein n | H5J25_05750 | P45784 | + | 1252459 - 1253178 | 24705.9 |
| Trna-his | Not Available | Not Available | + | 1253289 - 1253365 | Not Available |
| glu/leu/phe/val dehydrogenase | H5J25_05760 | Q60030 | + | 1253455 - 1254507 | 35857.6 |
| laci family dna-binding transcriptional regulator | H5J25_05765 | P37247 | + | 1254660 - 1255661 | 38168.5 |
| had-iib family hydrolase | H5J25_05770 | Q9Z2M7 | - | 1255736 - 1256479 | 26969.2 |
| cytochrome c biogenesis protein ccsa | H5J25_05775 | P30962 | + | 1256612 - 1257352 | 26951.5 |
| cytochrome c maturation protein ccme | H5J25_05780 | Q5NN30 | + | 1257453 - 1257899 | 15444.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.