Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas aliaeris |
| Strain | DH-S5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas aliaeris DH-S5
Accession NumberCP061035.1
Gene Summary
Adenine Count
695033 bp
Thymine Count
700924 bp
Guanine Count
1266042 bp
Cytosine Count
1254663 bp
Genome Length
3916662 bp
Protein-coding Genes
3639 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H5J25_05685 | Not Available | + | 1237163 - 1238794 | 54978.4 |
| tonb-dependent receptor | H5J25_05690 | Not Available | + | 1238889 - 1241672 | 99893.1 |
| pdz domain-containing protein | H5J25_05695 | P45777 | + | 1241907 - 1242752 | 28929.8 |
| type ii secretion system secretin gspd | H5J25_05700 | E3PJ86 | + | 1242749 - 1244956 | 76831.5 |
| laci family dna-binding transcriptional regulator | H5J25_05705 | Not Available | + | 1245097 - 1246610 | 54386.0 |
| type ii secretion system inner membrane protein gspf | H5J25_05710 | P31705 | + | 1246603 - 1247829 | 44630.3 |
| type ii secretion system major pseudopilin gspg | H5J25_05715 | Q00514 | + | 1247904 - 1248359 | 16256.2 |
| gsph/fimt family pseudopilin | H5J25_05720 | Not Available | + | 1248334 - 1248846 | 18249.8 |
| type ii secretion system minor pseudopilin gspi | H5J25_05725 | P45775 | + | 1248893 - 1249222 | 11465.8 |
| laci family dna-binding transcriptional regulator | H5J25_05730 | Not Available | + | 1249219 - 1249919 | 24639.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.