Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter foliorum |
| Strain | R-74623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter foliorum R-74623
Accession NumberCP162529.1
Gene Summary
Adenine Count
1904165 bp
Thymine Count
1903103 bp
Guanine Count
1162222 bp
Cytosine Count
1161565 bp
Genome Length
6131055 bp
Protein-coding Genes
5009 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminofutalosine synthase mqne | AB3465_01460 | Q5SK48 | + | 367650 - 368843 | 46139.1 |
| histidine phosphatase family protein | AB3465_01465 | Q8BZA9 | + | 368843 - 369454 | 23079.6 |
| menaquinone biosynthetic enzyme mqna/mqnd family protein | AB3465_01470 | Q9L0T8 | + | 369460 - 370185 | 27105.4 |
| dna mismatch repair protein muts | AB3465_01475 | A6LG92 | + | 370272 - 372881 | 97986.7 |
| nlpc/p60 family protein | AB3465_01480 | P0AFV6 | + | 372886 - 373398 | 18745.0 |
| duf3857 domain-containing protein | AB3465_01485 | Not Available | - | 373515 - 375422 | 72507.0 |
| duf3857 domain-containing protein | AB3465_01490 | Not Available | - | 375423 - 377399 | 74618.4 |
| exonuclease domain-containing protein | AB3465_01495 | Q895K2 | + | 377552 - 378556 | 38367.6 |
| trna epoxyqueuosine(34) reductase queg | AB3465_01500 | E6X4P3 | - | 378603 - 379544 | 36032.0 |
| hypothetical protein | AB3465_01505 | Not Available | + | 379621 - 379830 | 7928.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.