Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter foliorum |
| Strain | R-74623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter foliorum R-74623
Accession NumberCP162529.1
Gene Summary
Adenine Count
1904165 bp
Thymine Count
1903103 bp
Guanine Count
1162222 bp
Cytosine Count
1161565 bp
Genome Length
6131055 bp
Protein-coding Genes
5009 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | AB3465_02510 | Not Available | - | 606064 - 606660 | 23904.0 |
| purine nucleoside transporter punc | AB3465_02515 | P37597 | - | 606760 - 607956 | 43483.4 |
| duf4965 domain-containing protein | AB3465_02520 | Q2U4L7 | - | 608033 - 610498 | 91772.6 |
| catalase/peroxidase hpi | AB3465_02525 | A5FD11 | + | 610771 - 613047 | 83061.2 |
| hypothetical protein | AB3465_02530 | Not Available | - | 613141 - 613626 | 18688.5 |
| ferredoxin | AB3465_02535 | Not Available | + | 613827 - 614162 | 12598.9 |
| hypothetical protein | AB3465_02540 | Not Available | + | 614162 - 614713 | 21410.8 |
| nadph-dependent fmn reductase | AB3465_02545 | Q74HL7 | - | 614720 - 615259 | 20019.2 |
| hypothetical protein | AB3465_02550 | Not Available | - | 615328 - 616029 | 27122.4 |
| hypothetical protein | AB3465_02555 | Q5UQ13 | - | 616113 - 617105 | 35373.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.