Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter foliorum |
| Strain | R-74623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter foliorum R-74623
Accession NumberCP162529.1
Gene Summary
Adenine Count
1904165 bp
Thymine Count
1903103 bp
Guanine Count
1162222 bp
Cytosine Count
1161565 bp
Genome Length
6131055 bp
Protein-coding Genes
5009 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AB3465_01760 | Q00753 | + | 437509 - 438075 | 21496.1 |
| chromate transporter | AB3465_01765 | P17551 | - | 438072 - 439238 | 41665.3 |
| hypothetical protein | AB3465_01770 | Not Available | - | 439253 - 439774 | 18981.1 |
| chromate resistance protein chrb domain-containing protein | AB3465_01775 | P17552 | - | 439837 - 440676 | 32171.4 |
| twin-arginine translocase tata/tate family subunit | AB3465_01780 | Q3B2G6 | + | 440812 - 441012 | 6920.63 |
| carboxypeptidase-like regulatory domain-containing protein | AB3465_01785 | Not Available | - | 441019 - 442287 | 47975.9 |
| duf1801 domain-containing protein | AB3465_01790 | Not Available | - | 442834 - 443226 | 15071.0 |
| hypothetical protein | AB3465_01795 | Not Available | - | 443294 - 443815 | 20029.2 |
| plp-dependent aminotransferase family protein | AB3465_01800 | P39389 | - | 443907 - 445319 | 53297.2 |
| acyltransferase family protein | AB3465_01805 | P29113 | + | 445431 - 446546 | 42063.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.