Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter foliorum |
| Strain | R-74623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter foliorum R-74623
Accession NumberCP162529.1
Gene Summary
Adenine Count
1904165 bp
Thymine Count
1903103 bp
Guanine Count
1162222 bp
Cytosine Count
1161565 bp
Genome Length
6131055 bp
Protein-coding Genes
5009 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-l-arabinofuranosidase domain-containing protein | AB3465_01110 | E8MGH8 | - | 281939 - 286429 | 167992.0 |
| gntr family transcriptional regulator | AB3465_01115 | Q08792 | + | 286558 - 287535 | 37388.5 |
| tonb-dependent receptor | AB3465_01120 | A1JTG3 | - | 287698 - 290277 | 93136.7 |
| sigma-70 family rna polymerase sigma factor | AB3465_01125 | H8EXN1 | + | 290724 - 291278 | 21726.1 |
| fecr family protein | AB3465_01130 | Not Available | + | 291394 - 292416 | 38163.4 |
| tonb-dependent receptor | AB3465_01135 | T2KM18 | + | 292628 - 295564 | 106906.0 |
| sugar phosphate isomerase/epimerase family protein | AB3465_01140 | Q898E6 | + | 295637 - 296554 | 34021.8 |
| gluconate 2-dehydrogenase subunit 3 family protein | AB3465_01145 | Not Available | + | 296576 - 297211 | 23180.8 |
| gmc family oxidoreductase | AB3465_01150 | Q3YAT3 | + | 297230 - 298933 | 63769.3 |
| porin family protein | AB3465_01155 | Not Available | + | 299056 - 299658 | 21592.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.