Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter foliorum |
| Strain | R-74623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter foliorum R-74623
Accession NumberCP162529.1
Gene Summary
Adenine Count
1904165 bp
Thymine Count
1903103 bp
Guanine Count
1162222 bp
Cytosine Count
1161565 bp
Genome Length
6131055 bp
Protein-coding Genes
5009 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AB3465_01010 | Not Available | + | 262375 - 262794 | 15079.6 |
| Trna-thr | Not Available | Not Available | + | 262921 - 262993 | Not Available |
| outer membrane beta-barrel protein | AB3465_01020 | Not Available | - | 263258 - 265423 | 81551.2 |
| doxx family protein | AB3465_01025 | P54720 | - | 265435 - 265854 | 15394.6 |
| winged helix-turn-helix domain-containing protein | AB3465_01030 | Q9AE24 | + | 265951 - 266838 | 32360.4 |
| phosphatase pap2 family protein | AB3465_01035 | Q57819 | + | 266900 - 267811 | 34353.3 |
| phosphoethanolamine--lipid a transferase epta | AB3465_01040 | O24867 | + | 267798 - 269318 | 57816.6 |
| tlpa family protein disulfide reductase | AB3465_01045 | Not Available | + | 269473 - 270996 | 57610.9 |
| helix-turn-helix domain-containing protein | AB3465_01050 | O31834 | - | 271029 - 271229 | 7271.24 |
| duf2975 domain-containing protein | AB3465_01055 | Not Available | - | 271235 - 271885 | 24562.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.