Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | HMY34_04610 | P0ACV2 | - | 962656 - 963561 | 34658.0 |
| o-antigen ligase family protein | HMY34_04615 | Not Available | + | 963778 - 964926 | 43977.6 |
| glycosyltransferase family 9 protein | HMY34_04620 | P25742 | + | 964919 - 966022 | 41535.9 |
| glycosyltransferase family 2 protein | HMY34_04625 | P44029 | + | 966015 - 966776 | 28957.2 |
| glycosyltransferase | HMY34_04630 | Q68XF1 | + | 966773 - 967645 | 34105.9 |
| aldo/keto reductase | HMY34_04635 | P54569 | - | 967623 - 968420 | 28801.5 |
| hypothetical protein | HMY34_04640 | Not Available | - | 968420 - 969109 | 24460.2 |
| amp-binding protein | HMY34_04645 | A8AP56 | - | 969137 - 972034 | 105587.0 |
| gntr family transcriptional regulator | HMY34_04650 | O06747 | - | 972100 - 972930 | 30945.4 |
| nad-dependent protein deacylase | HMY34_04655 | Q9CM50 | - | 972924 - 973631 | 25666.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.