Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nickel-dependent hydrogenase large subunit | HMY34_04860 | P12636 | - | 1008320 - 1010041 | 64118.6 |
| hypothetical protein | HMY34_04865 | Not Available | - | 1010052 - 1010492 | 15915.5 |
| (fe-s)-binding protein | HMY34_04870 | P33393 | - | 1010489 - 1011766 | 46704.6 |
| hypothetical protein | HMY34_04875 | P33392 | - | 1011763 - 1012425 | 24694.2 |
| hydrogenase small subunit | HMY34_04880 | P21950 | - | 1012419 - 1013531 | 39187.6 |
| hypothetical protein | HMY34_04885 | Q43957 | - | 1013512 - 1013937 | 15836.8 |
| hyad/hybd family hydrogenase maturation endopeptidase | HMY34_04890 | P27649 | - | 1013934 - 1014449 | 19063.1 |
| ai-2e family transporter | HMY34_04895 | P96604 | - | 1014572 - 1015843 | 46384.4 |
| peptide deformylase | HMY34_04900 | Q8YVH1 | + | 1015936 - 1016484 | 20003.0 |
| atp-binding protein | HMY34_04905 | Not Available | + | 1016581 - 1017951 | 51340.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.