Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | HMY34_04460 | P55511 | - | 935349 - 935774 | 15898.1 |
| hypothetical protein | HMY34_04465 | Not Available | - | 935771 - 936019 | 9418.18 |
| hypothetical protein | HMY34_04470 | Not Available | - | 936109 - 936270 | 5956.02 |
| hypothetical protein | HMY34_04475 | Not Available | - | 936291 - 936464 | 6672.59 |
| class i sam-dependent dna methyltransferase | HMY34_04480 | O31504 | - | 936531 - 940115 | 133112.0 |
| uma2 family endonuclease | HMY34_04485 | P72873 | + | 940219 - 940794 | 21623.5 |
| hypothetical protein | HMY34_04490 | Not Available | - | 940887 - 941117 | 8779.35 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | HMY34_04495 | Not Available | + | 941254 - 941577 | 11714.4 |
| duf3368 domain-containing protein | HMY34_04500 | Not Available | + | 941574 - 942059 | 18095.4 |
| pin domain-containing protein | HMY34_04505 | Not Available | - | 942172 - 942591 | 15639.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.