Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | HMY34_04210 | P54662 | - | 882896 - 883504 | 21974.6 |
| hypothetical protein | HMY34_04215 | Not Available | + | 883929 - 885617 | 61868.7 |
| 30s ribosomal protein s21 | HMY34_04220 | B1KHE1 | + | 885762 - 885977 | 8497.52 |
| gatb/yqey domain-containing protein | HMY34_04225 | P54464 | + | 885980 - 886426 | 16419.0 |
| uroporphyrinogen decarboxylase | HMY34_04230 | C6DHS9 | + | 886468 - 887538 | 39177.2 |
| response regulator transcription factor | HMY34_04235 | A8R3T0 | - | 887540 - 888166 | 22533.8 |
| hypothetical protein | HMY34_04240 | Not Available | - | 888259 - 890322 | 77073.9 |
| hypothetical protein | HMY34_04245 | P09835 | - | 890319 - 891086 | 27728.1 |
| transposase | HMY34_04250 | Not Available | + | 891184 - 892707 | 56673.0 |
| hypothetical protein | HMY34_04255 | Not Available | - | 892884 - 894290 | 53367.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.