Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | HMY34_04160 | Not Available | - | 873829 - 874371 | 19151.3 |
| penicillin-binding protein 1b | HMY34_04165 | Q9KUC0 | - | 874380 - 876803 | 89186.9 |
| aaa family atpase | HMY34_04170 | P9WLN2 | + | 876854 - 878425 | 59294.8 |
| hypothetical protein | HMY34_04175 | Not Available | + | 878415 - 879275 | 30983.2 |
| type ii toxin-antitoxin system rata family toxin | HMY34_04180 | O68560 | + | 879284 - 879721 | 16525.0 |
| rnfh family protein | HMY34_04185 | C1D4H9 | + | 879708 - 880019 | 11498.0 |
| hypothetical protein | HMY34_04190 | Not Available | + | 880019 - 880267 | 9082.73 |
| outer membrane protein assembly factor bame | HMY34_04195 | Q9K1F0 | - | 880273 - 880602 | 12174.8 |
| ferric iron uptake transcriptional regulator | HMY34_04200 | Q48835 | + | 880670 - 881089 | 16010.0 |
| hypothetical protein | HMY34_04205 | P9WGK2 | - | 881094 - 882899 | 67839.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.