Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase formation protein hypd | HMY34_04110 | P26411 | - | 866162 - 867304 | 41883.7 |
| hypc/hybg/hupf family hydrogenase formation chaperone | HMY34_04115 | P40428 | - | 867301 - 867585 | 10128.3 |
| act domain protein | HMY34_04120 | P0A9I3 | - | 867600 - 868112 | 18323.9 |
| hypothetical protein | HMY34_04125 | Not Available | - | 868233 - 868448 | 7877.7 |
| hydrogenase nickel incorporation protein hypb | HMY34_04130 | Q43949 | - | 868523 - 869272 | 26739.2 |
| hydrogenase maturation nickel metallochaperone hypa | HMY34_04135 | Q0A726 | - | 869272 - 869613 | 12851.6 |
| nad(p)h-dependent oxidoreductase | HMY34_04140 | O34475 | - | 869653 - 870276 | 23186.7 |
| sulfate transporter cysz | HMY34_04145 | B7LL71 | + | 870361 - 871089 | 27282.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | HMY34_04150 | Q7CQE0 | - | 871199 - 871897 | 24145.1 |
| atp-dependent dna helicase | HMY34_04155 | P76257 | - | 871878 - 873905 | 75241.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.