Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fe-s protein assembly chaperone hsca | HMY34_04060 | Q87S24 | - | 856420 - 858282 | 66513.5 |
| fe-s protein assembly co-chaperone hscb | HMY34_04065 | B3R474 | - | 858291 - 858833 | 20939.7 |
| iron-sulfur cluster assembly protein isca | HMY34_04070 | C6DBI9 | - | 858833 - 859153 | 11490.7 |
| fe-s cluster assembly scaffold iscu | HMY34_04075 | P0ACD6 | - | 859155 - 859550 | 14169.9 |
| iscs subfamily cysteine desulfurase | HMY34_04080 | C4L7K2 | - | 859572 - 860786 | 45007.0 |
| fe-s cluster assembly transcriptional regulator iscr | HMY34_04085 | B7VJS5 | - | 860817 - 861284 | 17087.5 |
| serine o-acetyltransferase | HMY34_04090 | Q06750 | - | 861339 - 862136 | 29092.0 |
| carbamoyltransferase hypf | HMY34_04095 | Q02987 | - | 862162 - 864492 | 85491.8 |
| ykgj family cysteine cluster protein | HMY34_04100 | Not Available | - | 864496 - 865122 | 23483.4 |
| hydrogenase expression/formation protein hype | HMY34_04105 | P26412 | - | 865140 - 866165 | 35597.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.