Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | HMY34_03810 | Not Available | + | 791847 - 792284 | 16532.9 |
| duf86 domain-containing protein | HMY34_03815 | Q8TR85 | - | 792296 - 792682 | 14834.0 |
| nucleotidyltransferase domain-containing protein | HMY34_03820 | I3ZRF1 | - | 792675 - 792986 | 11592.8 |
| is481 family transposase | HMY34_03825 | Q88419 | - | 793023 - 793997 | 37556.1 |
| hypothetical protein | HMY34_03830 | Not Available | - | 794250 - 795542 | 50063.8 |
| isl3 family transposase | HMY34_03835 | Q06126 | + | 795511 - 796761 | 48227.7 |
| n-6 dna methylase | HMY34_03840 | Q60301 | - | 796796 - 798841 | 77581.7 |
| type ii toxin-antitoxin system vapb family antitoxin | HMY34_03845 | P9WJ32 | + | 798988 - 799188 | 7411.72 |
| duf3368 domain-containing protein | HMY34_03850 | Not Available | - | 799235 - 799702 | 17177.8 |
| prevent-host-death protein | HMY34_03855 | Not Available | - | 799690 - 800025 | 12031.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.